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SKILL.md

arbor

Agent skill fromK-Dense-AI/scientific-agent-skills

Applies Arbor Hypothesis Tree Refinement to research artifacts with repeatable evaluators, including model training, agent harnesses, data synthesis and benchmark optimization. Uses persistent hypotheses, isolated experiments, evidence propagation and held-out candidate comparison for multi-experiment research runs. Includes a standard-library state manager and guidance for the RUC-NLPIR Arbor CLI.

How to install arbor

install arbor
# install the scientific-agent-skills pack with the skills CLI
npx skills add K-Dense-AI/scientific-agent-skills

# or add only this skill to Claude Code: copy the folder

skills/arbor/

# into

~/.claude/skills/arbor/ (all projects)

.claude/skills/arbor/ (one project)

skills/arbor/SKILL.md

MITFull file
1# Arbor — Autonomous Optimization via Hypothesis Tree Refinement
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3## Overview
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5This skill runs an **Autonomous Optimization (AO)** loop: starting from an existing artifact and a measurable objective, improve it through many rounds of experiment and evaluation — without step-by-step human supervision, while checking for overfitting to the development signal. It's the right tool when the bottleneck isn't writing one good change, but *organizing dozens of trials* so that lessons accumulate instead of evaporating.
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7It implements **Hypothesis Tree Refinement (HTR)** from *Arbor* (Jin et al., 2026). The key idea: keep the research state in a persistent **hypothesis tree** rather than in conversation history. Each node binds a hypothesis, the distilled insight it produced, and a pointer to the artifact version that realizes it. You play the long-lived **coordinator** that owns this tree and decides where to search; short-lived **executor** subagents test one hypothesis each in isolated git worktrees and report back. A **held-out merge gate** admits a change only when it improves on a *test* evaluator executors do not optimize against. This is what turns trial-and-error into cumulative, auditable research.
8…

Excerpt shown under the repository's MIT license.

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