Skills for Real Engineers. Straight from my .agents directory.
bids
Agent skill fromK-Dense-AI/scientific-agent-skills
Organizes, queries, validates, and converts Brain Imaging Data Structure (BIDS) datasets. Supports organizing neuroscience and biomedical data (MRI, EEG, MEG, iEEG, PET, microscopy, NIRS, motion capture, EMG, MR spectroscopy, behavioral), querying BIDS layouts, validating compliance, converting DICOM to BIDS, writing metadata sidecars, or creating BIDS derivatives.
How to install bids
npx skills add K-Dense-AI/scientific-agent-skills# or add only this skill to Claude Code: copy the folder
skills/bids/
# into
~/.claude/skills/bids/ (all projects)
.claude/skills/bids/ (one project)
1# Brain Imaging Data Structure (BIDS)23## Overview45The Brain Imaging Data Structure (BIDS) is a community standard for organizing and describing neuroscience and biomedical research datasets. It defines a consistent file naming convention, directory hierarchy, and metadata schema so that datasets are immediately understandable by humans and software tools alike. BIDS is governed by the BIDS Specification (reviewed against v1.11.2, released 2026-09-29) and is maintained by the community via the BIDS-Standard GitHub organization.67While BIDS originated for MRI, it has grown well beyond neuroimaging. The specification now covers 11 modalities spanning imaging, electrophysiology, and behavioral data:89- **Imaging**: MRI (structural, functional, diffusion, fieldmaps, perfusion/ASL), PET, microscopy10- **Electrophysiology**: EEG, MEG, iEEG (intracranial EEG), EMG11- **Other**: NIRS (near-infrared spectroscopy), motion capture, behavioral data (without imaging), MR spectroscopy1213Active BEPs are extending BIDS further — notably BEP032 (microelectrode electrophysiology) proposes support for extracellular recordings including Neuropixels probes, bringing BIDS to a prevalent methodology in animal neuroscience research (see also the neuropixels-analysis skill).1415Repository submission requirements vary by modality and archive; check the target archive before preparing a deposit.16…
Excerpt shown under the repository's MIT license.
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